Package: SDLfilter 2.3.3

SDLfilter: Filtering and Assessing the Sample Size of Tracking Data

Functions to filter GPS/Argos locations, as well as assessing the sample size for the analysis of animal distributions. The filters remove temporal and spatial duplicates, fixes located at a given height from estimated high tide line, and locations with high error as described in Shimada et al. (2012) <doi:10.3354/meps09747> and Shimada et al. (2016) <doi:10.1007/s00227-015-2771-0>. Sample size for the analysis of animal distributions can be assessed by the conventional area-based approach or the alternative probability-based approach as described in Shimada et al. (2021) <doi:10.1111/2041-210X.13506>.

Authors:Takahiro Shimada

SDLfilter_2.3.3.tar.gz
SDLfilter_2.3.3.zip(r-4.7)SDLfilter_2.3.3.zip(r-4.6)SDLfilter_2.3.3.zip(r-4.5)
SDLfilter_2.3.3.tgz(r-4.6-any)SDLfilter_2.3.3.tgz(r-4.5-any)
SDLfilter_2.3.3.tar.gz(r-4.7-any)SDLfilter_2.3.3.tar.gz(r-4.6-any)
SDLfilter_2.3.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
SDLfilter/json (API)
NEWS

# Install 'SDLfilter' in R:
install.packages('SDLfilter', repos = c('https://takahiroshimada.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/takahiroshimada/sdlfilter/issues

Datasets:
  • Australia - A map of Australia
  • bathymodel - Bathymetry model for Sandy Strait, Australia
  • flatback - Flatback turtle tracking data
  • SandyStrait - A map of Sandy Strait, Australia
  • tidalplane - Tidal plane table for Sandy Strait, Australia
  • tidedata - Tidal data for Sandy Strait, Australia
  • turtle - Green turtle tracking data
  • turtle2 - Green turtle tracking data 2
  • ud_matrix - A matrix containing probability distributions of flatback turtles
  • ud_raster - A list of raster data containing probability distributions of flatback turtles

On CRAN:

Conda:

3.80 score 7 stars 18 scripts 324 downloads 19 exports 73 dependencies

Last updated from:82e483a7e9. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK184
source / vignettesOK228
linux-release-x86_64OK189
macos-release-arm64OK144
macos-oldrel-arm64OK173
windows-develOK147
windows-releaseOK128
windows-oldrelOK114
wasm-releaseOK134

Exports:asymptoteboot_areaboot_overlapcombn_overlapddfilterddfilter_loopddfilter_speeddepthfilterdistfilterdupfilterdupfilter_exactdupfilter_qidupfilter_spacedupfilter_timepercent_volto_maptrack_paramvmaxvmaxlp

Dependencies:abindaskpassbitopsclassclassIntclicpp11crayoncurldata.tableDBIdigestdplyre1071emmeansestimabilityfarvergenericsgeosphereggmapggplot2ggspatialgluegridExtragtablehmshttrisobandjpegjsonliteKernSmoothlabelinglifecyclelubridatemagrittrmapsMASSmimemvtnormnumDerivopensslpillarpkgconfigplyrpngpracmaprettyunitsprogressproxypurrrR6RColorBrewerRcpprlangrosms2S7scalessfstarsstringistringrsystibbletidyrtidyselecttimechangeunitsutf8vctrsviridisLitewithrwk